Cat Heart Disease Has Complex Genetics, No Single Cause

A multi-omic study of 109 cats found that feline hypertrophic cardiomyopathy is driven by many genes working together, not a single faulty gene — explaining why simple genetic tests often miss the disease.

Journal: G3: Genes, Genomes, Genetics
Sample Size: 109 cats with HCM and 29 controls
Study Type: Multi-omic analysis (whole-genome and RNA sequencing)
Published: 2025
Species:

Key Findings

  • No single high-penetrance variant sufficient to cause disease
  • Study identified rare high/moderate-impact variants in multiple genes
  • Differential gene expression patterns found in affected hearts
  • HCM in cats is genetically heterogeneous with contributions from multiple loci and epigenetic factors

Why Your Cat’s Heart Condition Is Harder to Predict Than You Think

Feline hypertrophic cardiomyopathy — better known as HCM — is the most common heart disease in cats. New research studying 109 cats with HCM shows that no single faulty gene is to blame. Instead, many genes work together to cause the condition. This finding explains something cat owners and vets have puzzled over for years: why simple genetic tests so often fail to catch the disease before it causes problems.

If your cat has been diagnosed with HCM, or if your vet has recommended genetic screening, this research matters to you.

What Is Feline HCM?

Think of HCM as a thickening of the heart’s walls. The heart muscle grows too large, which makes it stiffer and harder to fill with blood. Over time, this puts a strain on the whole body. Cats with HCM may show no signs at first, but the disease can eventually lead to heart failure or blood clots.

HCM is especially common in certain breeds, like Maine Coons and Ragdolls. But it can affect any cat. Because it often develops silently, early detection is a real challenge.

What Researchers Already Knew — and What Was Missing

Scientists have known for years that HCM runs in families. That pattern pointed to genetics as a major factor. Two specific gene mutations — one found in Maine Coons and another in Ragdolls — were discovered years ago. Genetic tests for these two mutations became available, and many breeders now use them.

But there was a big problem: many cats with HCM tested negative for both known mutations. And some cats with the mutations never developed the disease at all. Something important was clearly missing from the picture.

That gap is exactly what this study set out to fill.

How the Study Was Done

Researchers used a powerful combination of two high-tech methods to look at the DNA of 109 cats with HCM and 29 healthy cats used as a comparison group.

  • Whole-genome sequencing: Think of this as reading every single “letter” in a cat’s complete DNA instruction manual — all three billion of them. This let scientists look for rare changes scattered across the entire genome (the full set of genes), not just in the two spots previously known.
  • RNA sequencing: While DNA is the instruction manual, RNA is what the body actually uses to carry out those instructions. By studying RNA from heart tissue, researchers could see which genes were turned up or down in cats with HCM compared to healthy cats.

Together, these two methods gave scientists a far more complete view of the disease than any previous study.

What the Study Found

No Single Gene Is the Culprit

The headline finding is clear: there is no single gene mutation that, on its own, is enough to cause HCM in cats. The researchers looked at the entire genome and could not find one dominant, high-impact change shared across affected cats.

Instead, they found rare, significant changes spread across many different genes. No two affected cats had exactly the same genetic picture. This is what scientists call genetic heterogeneity — meaning the same disease can be caused by many different combinations of genetic factors.

Gene Activity Looks Different in Affected Hearts

When the team examined RNA from the heart tissue of HCM cats, they found clear differences in which genes were active compared to healthy cats. Some genes were turned up too high; others were turned down too low. These patterns give clues about how the disease develops at the cellular level, even when the DNA differences are hard to pinpoint.

Epigenetics May Also Play a Role

The study also flagged the likely involvement of epigenetic factors — changes that affect how genes are switched on or off without altering the DNA itself. You can think of it like adjusting the volume on a song without changing the actual music. These influences add another layer of complexity to understanding why some cats develop HCM and others do not.

What This Means for Cat Owners

Don’t Rely on a Single Gene Test

The most practical takeaway from this research is straightforward: a negative result on a standard HCM genetic test does not mean your cat is in the clear. Those tests check for only one or two known mutations. This study shows that HCM can arise from many different genetic changes that current tests do not screen for.

If your cat is a breed known for heart problems, or if a parent or sibling has been diagnosed with HCM, regular cardiac screening with a veterinary cardiologist is the most reliable path forward. That usually means a periodic heart ultrasound (called an echocardiogram), which can detect thickening before symptoms appear.

Breeding Decisions Are Complicated

For breeders, this research is a reminder that breeding away from HCM is not as simple as removing one gene mutation from a line. Because the disease involves many genes, and some affected cats may carry no known mutations at all, careful cardiac screening of breeding cats remains the gold standard.

When to Talk to Your Vet

Schedule a conversation with your vet if:

  • Your cat has been diagnosed with or is suspected of having HCM
  • You want to understand what genetic testing can — and cannot — tell you
  • You own a breed with elevated HCM risk and haven’t had a recent cardiac check
  • Your cat shows signs like rapid breathing, lethargy, or loss of appetite

Study Limitations

Because the disease is so genetically varied, no single study can identify every contributing variant. A much larger group of cats would be needed to map all the possible genetic pathways. The role of epigenetics — those gene-activity switches — also needs more investigation before it can be tested for or acted on clinically. For now, the big picture is clear, but the fine details are still being worked out.

The Bottom Line

Cat heart disease is not caused by one bad gene. A large study of 109 cats with HCM found that many different genetic changes — spread across the entire genome — contribute to the disease, and no single mutation tells the whole story. This explains why standard genetic tests have limited ability to predict HCM, and why regular heart ultrasounds remain the best tool for early detection, especially in at-risk breeds.

The science behind feline HCM is catching up with its complexity. For cat owners, the message is simple: keep up with cardiac checkups, especially if your cat is a breed prone to heart issues, and don’t assume a clean genetic test means a clean bill of cardiac health.


This article summarizes peer-reviewed research for educational purposes. Always consult with your veterinarian for personalized advice about your pet’s health and behavior.

Reference

Multiple researchers. (2025). Multi-omic analysis reveals complex genetics of feline hypertrophic cardiomyopathy. G3: Genes, Genomes, Genetics. DOI: https://doi.org/10.1093/g3journal/jkaf153